############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data flowTime ### ############################################################################## ############################################################################## * checking for file ‘flowTime/DESCRIPTION’ ... OK * preparing ‘flowTime’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘gating-vignette.Rmd’ using rmarkdown Quitting from gating-vignette.Rmd:36-48 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `library()`: ! there is no package called 'openCyto' --- Backtrace: ▆ 1. └─base::library("openCyto") ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'gating-vignette.Rmd' failed with diagnostics: there is no package called 'openCyto' --- failed re-building ‘gating-vignette.Rmd’ --- re-building ‘steady-state-vignette.Rmd’ using rmarkdown 2025-04-21 16:50:39.293 R[38994:723295842] XType: com.apple.fonts is not accessible. 2025-04-21 16:50:39.293 R[38994:723295842] XType: XTFontStaticRegistry is enabled. --- finished re-building ‘steady-state-vignette.Rmd’ --- re-building ‘time-course-vignette.Rmd’ using rmarkdown --- finished re-building ‘time-course-vignette.Rmd’ SUMMARY: processing the following file failed: ‘gating-vignette.Rmd’ Error: Vignette re-building failed. Execution halted