############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r bluster -R && F:\biocbuild\bbs-3.22-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data bluster ### ############################################################################## ############################################################################## * checking for file 'bluster/DESCRIPTION' ... OK * preparing 'bluster': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'clusterRows.Rmd' using rmarkdown Quitting from clusterRows.Rmd:122-126 [unnamed-chunk-9] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `loadNamespace()`: ! there is no package called 'mbkmeans' --- Backtrace: ▆ 1. ├─bluster::clusterRows(mat, MbkmeansParam(20)) 2. ├─bluster::clusterRows(mat, MbkmeansParam(20)) 3. └─base::loadNamespace(x) 4. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL) 5. └─base (local) withOneRestart(expr, restarts[[1L]]) 6. └─base (local) doWithOneRestart(return(expr), restart) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'clusterRows.Rmd' failed with diagnostics: there is no package called 'mbkmeans' --- failed re-building 'clusterRows.Rmd' --- re-building 'diagnostics.Rmd' using rmarkdown --- finished re-building 'diagnostics.Rmd' SUMMARY: processing the following file failed: 'clusterRows.Rmd' Error: Vignette re-building failed. Execution halted