##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data NeuCA
###
##############################################################################
##############################################################################


* checking for file ‘NeuCA/DESCRIPTION’ ... OK
* preparing ‘NeuCA’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘NeuCA.Rmd’ using rmarkdown

Quitting from NeuCA.Rmd:75-80 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! Installation of Python not found, Python bindings not loaded.
See the Python "Order of Discovery" here: https://rstudio.github.io/reticulate/articles/versions.html#order-of-discovery.
---
Backtrace:
     ▆
  1. ├─NeuCA::NeuCA(...)
  2. │ └─NeuCA:::BigNN(...)
  3. │   └─... %>% ...
  4. ├─generics::compile(...)
  5. ├─keras::layer_dense(., units = nClass, activation = last_act)
  6. │ ├─keras::create_layer(...)
  7. │ ├─keras$layers
  8. │ └─reticulate:::`$.python.builtin.module`(keras, "layers")
  9. │   └─reticulate::py_get_attr(x, name, TRUE)
 10. └─reticulate (local) `<fn>`()
 11.   └─reticulate:::initialize_python()
 12.     └─reticulate (local) python_not_found("Installation of Python not found, Python bindings not loaded.")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'NeuCA.Rmd' failed with diagnostics:
Installation of Python not found, Python bindings not loaded.
See the Python "Order of Discovery" here: https://rstudio.github.io/reticulate/articles/versions.html#order-of-discovery.
--- failed re-building ‘NeuCA.Rmd’

SUMMARY: processing the following file failed:
  ‘NeuCA.Rmd’

Error: Vignette re-building failed.
Execution halted