############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data CEMiTool ### ############################################################################## ############################################################################## * checking for file ‘CEMiTool/DESCRIPTION’ ... OK * preparing ‘CEMiTool’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘CEMiTool.Rmd’ using rmarkdown Quitting from CEMiTool.Rmd:43-45 [unnamed-chunk-2] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: ! c("assignment of an object of class \"ggplot2::ggplot\" is not valid for @'mean_var_plot' in an object of class \"CEMiTool\"; is(value, \"gg\") is not TRUE", "assignment of an object of class \"ggplot\" is not valid for @'mean_var_plot' in an object of class \"CEMiTool\"; is(value, \"gg\") is not TRUE", "assignment of an object of class \"ggplot2::gg\" is not valid for @'mean_var_plot' in an object of class \"CEMiTool\"; is(value, \"gg\") is not TRUE", "assignment of an object of class \"S7_object\" is not valid for @'mean_var_plot' in an object of class \"CEMiTool\"; is(value, \"gg\") is not TRUE", "assignment of an object of class \"gg\" is not valid for @'mean_var_plot' in an object of class \"CEMiTool\"; is(value, \"gg\") is not TRUE") --- Backtrace: ▆ 1. └─CEMiTool::cemitool(expr0) 2. ├─CEMiTool::plot_mean_var(results) 3. └─CEMiTool::plot_mean_var(results) 4. └─CEMiTool (local) .local(cem, ...) 5. └─methods (local) ``(``, "mean_var_plot", ``) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'CEMiTool.Rmd' failed with diagnostics: c("assignment of an object of class \"ggplot2::ggplot\" is not valid for @'mean_var_plot' in an object of class \"CEMiTool\"; is(value, \"gg\") is not TRUE", "assignment of an object of class \"ggplot\" is not valid for @'mean_var_plot' in an object of class \"CEMiTool\"; is(value, \"gg\") is not TRUE", "assignment of an object of class \"ggplot2::gg\" is not valid for @'mean_var_plot' in an object of class \"CEMiTool\"; is(value, \"gg\") is not TRUE", "assignment of an object of class \"S7_object\" is not valid for @'mean_var_plot' in an object of class \"CEMiTool\"; is(value, \"gg\") is not TRUE", "assignment of an object of class \"gg\" is not valid for @'mean_var_plot' in an object of class \"CEMiTool\"; is(value, \"gg\") is not TRUE") --- failed re-building ‘CEMiTool.Rmd’ SUMMARY: processing the following file failed: ‘CEMiTool.Rmd’ Error: Vignette re-building failed. Execution halted