############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data orthos ### ############################################################################## ############################################################################## * checking for file ‘orthos/DESCRIPTION’ ... OK * preparing ‘orthos’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘orthosIntro.Rmd’ using rmarkdown Quitting from orthosIntro.Rmd:280-285 [unnamed-chunk-4] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `use_python()`: ! Specified version of python '/home/biocbuild/.cache/R/basilisk/1.21.5/orthos/1.7.2/orthos/bin/python' does not exist. --- Backtrace: ▆ 1. └─orthos::decomposeVar(...) 2. └─basilisk::basiliskStart(orthosenv, testload = "tensorflow") 3. └─basilisk::useBasiliskEnv(envpath, full.activation) 4. └─reticulate::use_virtualenv(envpath, required = TRUE) 5. └─reticulate::use_python(python, required = required) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'orthosIntro.Rmd' failed with diagnostics: Specified version of python '/home/biocbuild/.cache/R/basilisk/1.21.5/orthos/1.7.2/orthos/bin/python' does not exist. --- failed re-building ‘orthosIntro.Rmd’ SUMMARY: processing the following file failed: ‘orthosIntro.Rmd’ Error: Vignette re-building failed. Execution halted