Back to --- experimental! --- GPU-enabled build/check report for BioC 3.22 Report updated every 6 hours |
This page was generated on 2025-06-18 10:45 -0400 (Wed, 18 Jun 2025).
Hostname: | biocgpu |
OS: | Linux (Ubuntu 24.04.2 LTS) |
Arch: | x86_64 |
Platform: | x86_64-linux-gnu |
R version: | 4.5.0 Patched (2025-05-01 r88189) -- "How About a Twenty-Six" |
R environment variables: | Renviron.bioc |
R variable (VAR) | Value ('R CMD config <VAR>' output) |
CC | gcc -std=gnu2x |
CFLAGS | -g -O2 -Wall -Werror=format-security |
CPICFLAGS | -fpic |
Please refer to 'R CMD config -h' for the meaning of these variables |
Compiler version ('gcc -std=gnu2x --version' output):
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
R variable (VAR) | Value ('R CMD config <VAR>' output) |
CXX | g++ -std=gnu++17 |
CXXFLAGS | -g -O2 -Wall -Werror=format-security |
CXXPICFLAGS | -fpic |
Please refer to 'R CMD config -h' for the meaning of these variables |
Compiler version ('g++ -std=gnu++17 --version' output):
g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
R variable (VAR) | Value ('R CMD config <VAR>' output) |
CXX11 | g++ |
CXX11FLAGS | -g -O2 -Wall -Werror=format-security |
CXX11PICFLAGS | -fpic |
CXX11STD | -std=gnu++11 |
Please refer to 'R CMD config -h' for the meaning of these variables |
Compiler version ('g++ --version' output):
g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
R variable (VAR) | Value ('R CMD config <VAR>' output) |
CXX14 | g++ |
CXX14FLAGS | -g -O2 -Wall -Werror=format-security |
CXX14PICFLAGS | -fpic |
CXX14STD | -std=gnu++14 |
Please refer to 'R CMD config -h' for the meaning of these variables |
Compiler version ('g++ --version' output):
g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
R variable (VAR) | Value ('R CMD config <VAR>' output) |
CXX17 | g++ |
CXX17FLAGS | -g -O2 -Wall -Werror=format-security |
CXX17PICFLAGS | -fpic |
CXX17STD | -std=gnu++17 |
Please refer to 'R CMD config -h' for the meaning of these variables |
Compiler version ('g++ --version' output):
g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
java version ('java --version' output):
openjdk 21.0.7 2025-04-15 OpenJDK Runtime Environment (build 21.0.7+6-Ubuntu-0ubuntu124.04) OpenJDK 64-Bit Server VM (build 21.0.7+6-Ubuntu-0ubuntu124.04, mixed mode, sharing)
pandoc version ('pandoc --version' output):
pandoc 3.1.3 Features: -server +lua Scripting engine: Lua 5.4 User data directory: /home/biocbuild/.local/share/pandoc Copyright (C) 2006-2023 John MacFarlane. Web: https://pandoc.org This is free software; see the source for copying conditions. There is no warranty, not even for merchantability or fitness for a particular purpose.
nvcc version ('nvcc --version' output):
nvcc: NVIDIA (R) Cuda compiler driver Copyright (c) 2005-2024 NVIDIA Corporation Built on Thu_Jun__6_02:18:23_PDT_2024 Cuda compilation tools, release 12.5, V12.5.82 Build cuda_12.5.r12.5/compiler.34385749_0
nvidia-smi version ('nvidia-smi --version' output):
Wed Jun 18 09:49:48 2025 +---------------------------------------------------------------------------------------+ | NVIDIA-SMI 535.230.02 Driver Version: 535.230.02 CUDA Version: 12.2 | |-----------------------------------------+----------------------+----------------------+ | GPU Name Persistence-M | Bus-Id Disp.A | Volatile Uncorr. ECC | | Fan Temp Perf Pwr:Usage/Cap | Memory-Usage | GPU-Util Compute M. | | | | MIG M. | |=========================================+======================+======================| | 0 GRID A100X-10C On | 00000000:04:00.0 Off | 0 | | N/A N/A P0 N/A / N/A | 0MiB / 10240MiB | 0% Default | | | | Disabled | +-----------------------------------------+----------------------+----------------------+ +---------------------------------------------------------------------------------------+ | Processes: | | GPU GI CI PID Type Process name GPU Memory | | ID ID Usage | |=======================================================================================| | No running processes found | +---------------------------------------------------------------------------------------+
More information might be added in the future...