############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r openPrimeR -R && F:\biocbuild\bbs-3.22-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data openPrimeR ### ############################################################################## ############################################################################## * checking for file 'openPrimeR/DESCRIPTION' ... OK * preparing 'openPrimeR': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'openPrimeR_vignette.Rmd' using rmarkdown Quitting from openPrimeR_vignette.Rmd:113-116 [load_templates] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `read_templates_single()`: ! Unsupported template input file type or error reading data for file: 'F:/biocbuild/bbs-3.22-bioc/tmpdir/RtmpI7C1mr/Rinst1db1468df56f2/openPrimeR/extdata/IMGT_data/templates/Homo_sapiens_IGH_functional_exon.fasta' --- Backtrace: ▆ 1. └─openPrimeR::read_templates(...) 2. └─openPrimeR:::read_templates_single(...) 3. └─openPrimeR:::my.error(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'openPrimeR_vignette.Rmd' failed with diagnostics: Unsupported template input file type or error reading data for file: 'F:/biocbuild/bbs-3.22-bioc/tmpdir/RtmpI7C1mr/Rinst1db1468df56f2/openPrimeR/extdata/IMGT_data/templates/Homo_sapiens_IGH_functional_exon.fasta' --- failed re-building 'openPrimeR_vignette.Rmd' SUMMARY: processing the following file failed: 'openPrimeR_vignette.Rmd' Error: Vignette re-building failed. Execution halted