############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD INSTALL nucleR ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.5.0/site-library’ * installing *source* package ‘nucleR’ ... ** this is package ‘nucleR’ version ‘2.41.0’ ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading Loading required package: usethis Welcome at Thu Jun 26 21:09:55 2025 No methods found in package ‘GenomeInfoDb’ for request: ‘seqlevels<-’ when loading ‘nucleR’ No methods found in package ‘GenomeInfoDb’ for request: ‘seqnames’ when loading ‘nucleR’ No methods found in package ‘GenomeInfoDb’ for request: ‘sortSeqlevels’ when loading ‘nucleR’ Goodbye at Thu Jun 26 21:10:10 2025 ** help *** installing help indices ** building package indices Loading required package: usethis Welcome at Thu Jun 26 21:10:12 2025 Goodbye at Thu Jun 26 21:10:12 2025 ** installing vignettes ** testing if installed package can be loaded from temporary location Loading required package: usethis Welcome at Thu Jun 26 21:10:13 2025 No methods found in package ‘GenomeInfoDb’ for request: ‘seqlevels<-’ when loading ‘nucleR’ No methods found in package ‘GenomeInfoDb’ for request: ‘seqnames’ when loading ‘nucleR’ No methods found in package ‘GenomeInfoDb’ for request: ‘sortSeqlevels’ when loading ‘nucleR’ Goodbye at Thu Jun 26 21:10:26 2025 ** testing if installed package can be loaded from final location Loading required package: usethis Welcome at Thu Jun 26 21:10:28 2025 No methods found in package ‘GenomeInfoDb’ for request: ‘seqlevels<-’ when loading ‘nucleR’ No methods found in package ‘GenomeInfoDb’ for request: ‘seqnames’ when loading ‘nucleR’ No methods found in package ‘GenomeInfoDb’ for request: ‘sortSeqlevels’ when loading ‘nucleR’ Goodbye at Thu Jun 26 21:10:41 2025 ** testing if installed package keeps a record of temporary installation path * DONE (nucleR)