############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data ggkegg ### ############################################################################## ############################################################################## * checking for file ‘ggkegg/DESCRIPTION’ ... OK * preparing ‘ggkegg’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘usage_of_ggkegg.Rmd’ using rmarkdown trying URL 'https://rest.kegg.jp/get/bpsp00270/kgml' Quitting from usage_of_ggkegg.Rmd:193-196 [ggkegg] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `download.file()`: ! cannot open URL 'https://rest.kegg.jp/get/bpsp00270/kgml' --- Backtrace: ▆ 1. └─ggkegg::ggkegg("bpsp00270") 2. └─ggkegg::pathway(...) 3. └─utils::download.file(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'usage_of_ggkegg.Rmd' failed with diagnostics: cannot open URL 'https://rest.kegg.jp/get/bpsp00270/kgml' --- failed re-building ‘usage_of_ggkegg.Rmd’ SUMMARY: processing the following file failed: ‘usage_of_ggkegg.Rmd’ Error: Vignette re-building failed. Execution halted