##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data biodbNci
###
##############################################################################
##############################################################################


* checking for file ‘biodbNci/DESCRIPTION’ ... OK
* preparing ‘biodbNci’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘biodbNci.Rmd’ using rmarkdown
INFO  [15:43:42.499] Loading definitions from package biodb version 1.17.1.
INFO  [15:43:43.192] Loading definitions from package biodbChebi version 1.15.1.
INFO  [15:43:43.202] Loading definitions from package biodbHmdb version 1.15.1.
INFO  [15:43:43.212] Loading definitions from package biodbNcbi version 1.13.1.
INFO  [15:43:43.220] Loading definitions from package biodbNci version 1.13.1.
INFO  [15:43:43.222] Loading definitions from package biodbUniprot version 1.15.1.
INFO  [15:43:43.333] Extract whole database of nci.cactus.
INFO  [15:43:43.334] Extracting content of downloaded biodbNci, a library for connecting to the National Cancer Institute (USA) CACTUS Database....

Quitting from biodbNci.Rmd:72-75 [unnamed-chunk-5]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `private$doExtractDownload()`:
! attempt to apply non-function
---
Backtrace:
    ▆
 1. └─conn$getEntryIds(2)
 2.   └─private$doGetEntryIds(max.results = max.results, ...)
 3.     └─self$download()
 4.       └─private$doExtractDownload()
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'biodbNci.Rmd' failed with diagnostics:
attempt to apply non-function
--- failed re-building ‘biodbNci.Rmd’

SUMMARY: processing the following file failed:
  ‘biodbNci.Rmd’

Error: Vignette re-building failed.
Execution halted