############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data SomaticSignatures ### ############################################################################## ############################################################################## * checking for file ‘SomaticSignatures/DESCRIPTION’ ... OK * preparing ‘SomaticSignatures’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘SomaticSignatures-vignette.Rhtml’ using knitr Quitting from SomaticSignatures-vignette.Rhtml:338-341 [load_data_package] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `library()`: ! there is no package called 'BSgenome.Hsapiens.1000genomes.hs37d5' --- Backtrace: ▆ 1. └─base::library(BSgenome.Hsapiens.1000genomes.hs37d5) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'SomaticSignatures-vignette.Rhtml' failed with diagnostics: there is no package called 'BSgenome.Hsapiens.1000genomes.hs37d5' --- failed re-building ‘SomaticSignatures-vignette.Rhtml’ SUMMARY: processing the following file failed: ‘SomaticSignatures-vignette.Rhtml’ Error: Vignette re-building failed. Execution halted