############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SGSeq ### ############################################################################## ############################################################################## * checking for file ‘SGSeq/DESCRIPTION’ ... OK * preparing ‘SGSeq’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘SGSeq.Rmd’ using rmarkdown Quitting from SGSeq.Rmd:79-84 [unnamed-chunk-5] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `keepSeqlevels()`: ! could not find function "keepSeqlevels" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'SGSeq.Rmd' failed with diagnostics: could not find function "keepSeqlevels" --- failed re-building ‘SGSeq.Rmd’ SUMMARY: processing the following file failed: ‘SGSeq.Rmd’ Error: Vignette re-building failed. Execution halted