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### Running command:
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###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 HiCool
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* checking for file ‘HiCool/DESCRIPTION’ ... OK
* preparing ‘HiCool’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘HiCool.Rmd’ using rmarkdown
Collecting pip
  Using cached pip-24.0-py3-none-any.whl (2.1 MB)
Collecting wheel
  Using cached wheel-0.42.0-py3-none-any.whl (65 kB)
Collecting setuptools
  Using cached setuptools-68.0.0-py3-none-any.whl (804 kB)
Installing collected packages: pip, wheel, setuptools
  Attempting uninstall: pip
    Found existing installation: pip 20.1.1
    Uninstalling pip-20.1.1:
      Successfully uninstalled pip-20.1.1
  Attempting uninstall: setuptools
    Found existing installation: setuptools 47.1.0
    Uninstalling setuptools-47.1.0:
      Successfully uninstalled setuptools-47.1.0
Successfully installed pip-24.0 setuptools-68.0.0 wheel-0.42.0
ERROR: Could not find a version that satisfies the requirement bowtie2==2.5.0 (from versions: none)
ERROR: No matching distribution found for bowtie2==2.5.0

Quitting from HiCool.Rmd:70-80 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! Error installing package(s): "'bowtie2==2.5.0'", "'samtools==1.16.1'", "'hicstuff==3.1.5'", "'chromosight==1.6.3'", "'cooler==0.9.1'"
---
Backtrace:
    ▆
 1. └─HiCool::HiCool(...)
 2.   └─basilisk::basiliskStart(env_HiCool)
 3.     └─basilisk::obtainEnvironmentPath(env)
 4.       └─basilisk::setupBasiliskEnv(...)
 5.         └─reticulate::virtualenv_create(...)
 6.           └─reticulate:::pip_install(python, packages)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'HiCool.Rmd' failed with diagnostics:
Error installing package(s): "'bowtie2==2.5.0'", "'samtools==1.16.1'", "'hicstuff==3.1.5'", "'chromosight==1.6.3'", "'cooler==0.9.1'"
--- failed re-building ‘HiCool.Rmd’

SUMMARY: processing the following file failed:
  ‘HiCool.Rmd’

Error: Vignette re-building failed.
Execution halted