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### Running command:
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###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data GeneTonic
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* checking for file ‘GeneTonic/DESCRIPTION’ ... OK
* preparing ‘GeneTonic’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘GeneTonic_manual.Rmd’ using rmarkdown

Quitting from GeneTonic_manual.Rmd:125-135 [create_dds]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `library()`:
! there is no package called 'macrophage'
---
Backtrace:
    ▆
 1. └─base::library("macrophage")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'GeneTonic_manual.Rmd' failed with diagnostics:
there is no package called 'macrophage'
--- failed re-building ‘GeneTonic_manual.Rmd’

SUMMARY: processing the following file failed:
  ‘GeneTonic_manual.Rmd’

Error: Vignette re-building failed.
Execution halted