############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 DMRcate ### ############################################################################## ############################################################################## * checking for file ‘DMRcate/DESCRIPTION’ ... OK * preparing ‘DMRcate’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘EPICv1_and_450K.Rnw’ using knitr Quitting from EPICv1_and_450K.Rnw:125-132 [plotting] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: ! Your query has been redirected to http://status.ensembl.org indicating this Ensembl service is currently unavailable. Look at ?useEnsembl for details on how to try a mirror site. --- Backtrace: x 1. \-DMRcate::DMR.plot(...) 2. +-base::suppressWarnings(...) 3. | \-base::withCallingHandlers(...) 4. \-biomaRt::useEnsembl(...) 5. \-biomaRt:::.listMarts(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'EPICv1_and_450K.Rnw' failed with diagnostics: Your query has been redirected to http://status.ensembl.org indicating this Ensembl service is currently unavailable. Look at ?useEnsembl for details on how to try a mirror site. --- failed re-building ‘EPICv1_and_450K.Rnw’ --- re-building ‘EPICv2.Rnw’ using knitr --- finished re-building ‘EPICv2.Rnw’ --- re-building ‘sequencing.Rnw’ using knitr --- finished re-building ‘sequencing.Rnw’ SUMMARY: processing the following file failed: ‘EPICv1_and_450K.Rnw’ Error: Vignette re-building failed. Execution halted