############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r CPSM -R && F:\biocbuild\bbs-3.22-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data CPSM ### ############################################################################## ############################################################################## * checking for file 'CPSM/DESCRIPTION' ... OK * preparing 'CPSM': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... OK * checking for LF line-endings in source and make files and shell scripts * checking for empty or unneeded directories * looking to see if a 'data/datalist' file should be added NB: this package now depends on R (>= 3.5.0) WARNING: Added dependency on R >= 3.5.0 because serialized objects in serialize/load version 3 cannot be read in older versions of R. File(s) containing such objects: 'CPSM/data/Example_TCGA_LGG_FPKM_data.rda' 'CPSM/data/Key_Clin_feature_list.rda' 'CPSM/data/Key_Clin_features_with_PI_list.rda' 'CPSM/data/Key_PI_list.rda' 'CPSM/data/Key_univariate_features_list.rda' 'CPSM/data/Key_univariate_features_with_Clin_list.rda' 'CPSM/data/New_data.rda' 'CPSM/data/Test_Clin.rda' 'CPSM/data/Test_Norm_data.rda' 'CPSM/data/Test_PI_data.rda' 'CPSM/data/Test_Uni_sig_data.rda' 'CPSM/data/Test_results.rda' 'CPSM/data/Train_Clin.rda' 'CPSM/data/Train_Data_Nomogram_input.rda' 'CPSM/data/Train_Norm_data.rda' 'CPSM/data/Train_PI_data.rda' 'CPSM/data/Train_Uni_sig_data.rda' 'CPSM/data/Train_results.rda' 'CPSM/data/feature_list_for_Nomogram.rda' 'CPSM/data/mean_median_survival_time_data.rda' 'CPSM/data/survCurves_data.rda' 'CPSM/data/test_FPKM.rda' 'CPSM/data/train_FPKM.rda' * building 'CPSM_1.1.2.tar.gz'