############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MSstatsConvert ### ############################################################################## ############################################################################## * checking for file ‘MSstatsConvert/DESCRIPTION’ ... OK * preparing ‘MSstatsConvert’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package (it is needed to build vignettes) * creating vignettes ... ERROR --- re-building ‘msstats_data_format.Rmd’ using rmarkdown Quitting from msstats_data_format.Rmd:204-250 [unnamed-chunk-6] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `[.data.table`: ! attempt access index 7/7 in VECTOR_ELT --- Backtrace: ▆ 1. └─MSstatsConvert::MSstatsPreprocess(...) 2. └─MSstatsConvert:::.filterFewMeasurements(input, 1, FALSE) 3. ├─...[] 4. └─data.table:::`[.data.table`(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'msstats_data_format.Rmd' failed with diagnostics: attempt access index 7/7 in VECTOR_ELT --- failed re-building ‘msstats_data_format.Rmd’ SUMMARY: processing the following file failed: ‘msstats_data_format.Rmd’ Error: Vignette re-building failed. Execution halted