Hostname:	biocgpu
OS:	Linux (Ubuntu 24.04.2 LTS)
Arch:	x86_64
Platform:	x86_64-linux-gnu
R version:	4.5.1 (2025-06-13) -- "Great Square Root"
R environment variables:	Renviron.bioc

R variable (VAR)	Value ('R CMD config <VAR>' output)
CC	gcc -std=gnu2x
CFLAGS	-g -O2 -Wall -Werror=format-security
CPICFLAGS	-fpic
Please refer to 'R CMD config -h' for the meaning of these variables

Compiler version ('gcc -std=gnu2x --version' output):

gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
Copyright (C) 2023 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

R variable (VAR)	Value ('R CMD config <VAR>' output)
CXX	g++ -std=gnu++17
CXXFLAGS	-g -O2 -Wall -Werror=format-security
CXXPICFLAGS	-fpic
Please refer to 'R CMD config -h' for the meaning of these variables

Compiler version ('g++ -std=gnu++17 --version' output):

g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
Copyright (C) 2023 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

R variable (VAR)	Value ('R CMD config <VAR>' output)
CXX11	g++
CXX11FLAGS	-g -O2 -Wall -Werror=format-security
CXX11PICFLAGS	-fpic
CXX11STD	-std=gnu++11
Please refer to 'R CMD config -h' for the meaning of these variables

Compiler version ('g++ --version' output):

g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
Copyright (C) 2023 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

R variable (VAR)	Value ('R CMD config <VAR>' output)
CXX14	g++
CXX14FLAGS	-g -O2 -Wall -Werror=format-security
CXX14PICFLAGS	-fpic
CXX14STD	-std=gnu++14
Please refer to 'R CMD config -h' for the meaning of these variables

Compiler version ('g++ --version' output):

g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
Copyright (C) 2023 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

R variable (VAR)	Value ('R CMD config <VAR>' output)
CXX17	g++
CXX17FLAGS	-g -O2 -Wall -Werror=format-security
CXX17PICFLAGS	-fpic
CXX17STD	-std=gnu++17
Please refer to 'R CMD config -h' for the meaning of these variables

Compiler version ('g++ --version' output):

g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
Copyright (C) 2023 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

java version ('java --version' output):

openjdk 21.0.7 2025-04-15
OpenJDK Runtime Environment (build 21.0.7+6-Ubuntu-0ubuntu124.04)
OpenJDK 64-Bit Server VM (build 21.0.7+6-Ubuntu-0ubuntu124.04, mixed mode, sharing)

pandoc version ('pandoc --version' output):

pandoc 3.1.3
Features: -server +lua
Scripting engine: Lua 5.4
User data directory: /home/biocbuild/.local/share/pandoc
Copyright (C) 2006-2023 John MacFarlane. Web: https://pandoc.org
This is free software; see the source for copying conditions. There is no
warranty, not even for merchantability or fitness for a particular purpose.

nvcc version ('nvcc --version' output):

nvcc: NVIDIA (R) Cuda compiler driver
Copyright (c) 2005-2024 NVIDIA Corporation
Built on Thu_Jun__6_02:18:23_PDT_2024
Cuda compilation tools, release 12.5, V12.5.82
Build cuda_12.5.r12.5/compiler.34385749_0

nvidia-smi version ('nvidia-smi --version' output):

NVIDIA-SMI has failed because it couldn't communicate with the NVIDIA driver. Make sure that the latest NVIDIA driver is installed and running.