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### Running command:
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###   /home/biocbuild/R/R/bin/R CMD check --install=check:spatialFDA.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings spatialFDA_1.1.16.tar.gz
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* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/spatialFDA.Rcheck’
* using R version 4.5.0 (2025-04-11)
* using platform: aarch64-unknown-linux-gnu
* R was compiled by
    aarch64-unknown-linux-gnu-gcc (GCC) 14.2.0
    GNU Fortran (GCC) 14.2.0
* running under: openEuler 24.03 (LTS)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘spatialFDA/DESCRIPTION’ ... OK
* this is package ‘spatialFDA’ version ‘1.1.16’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘spatialFDA’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
                            user system elapsed
crossSpatialInference     26.671  0.526  43.639
plotCrossMetricPerFov     26.286  0.351  38.703
plotCrossHeatmap          25.541  0.175  39.987
extractCrossInferenceData 25.263  0.347  43.434
calcCrossMetricPerFov     22.518  1.150  41.033
spatialInference          12.049  0.147  23.855
functionalGam             11.855  0.334  21.135
plotMdl                   11.500  0.151  24.077
functionalPCA              9.382  0.231  16.333
plotFbPlot                 9.386  0.155  16.878
prepData                   9.114  0.271  20.263
calcMetricPerFov           9.057  0.293  21.171
plotMetricPerFov           8.717  0.230  16.629
plotFpca                   8.567  0.194  17.909
print.fpca                 8.068  0.188  15.584
dot-dfToppp                7.193  0.246  16.053
dot-speToDf                7.105  0.226  13.794
dot-extractMetric          7.124  0.197  13.896
dot-loadExample            6.340  0.239  14.669
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: OK