############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data smoppix ### ############################################################################## ############################################################################## * checking for file ‘smoppix/DESCRIPTION’ ... OK * preparing ‘smoppix’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to process help pages Loading required namespace: smoppix * saving partial Rd database * creating vignettes ... ERROR --- re-building ‘smoppixVignette.Rmd’ using rmarkdown 2025-12-04 23:19:01.463 R[88185:89053843] XType: com.apple.fonts is not accessible. 2025-12-04 23:19:01.463 R[88185:89053843] XType: XTFontStaticRegistry is enabled. Quitting from smoppixVignette.Rmd:195-197 [fitLmms] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `.makeCC()`: ! must have a numeric 'tol' component --- Backtrace: ▆ 1. └─smoppix::fitLMMs(nnObj, fixedVars = "day", randomVars = "root") 2. └─base::lapply(...) 3. └─smoppix (local) FUN(X[[i]], ...) 4. └─smoppix:::fitLMMsSingle(...) 5. ├─lme4::lmerControl(...) 6. │ └─lme4:::chk.cconv(check.conv.singular, me) 7. └─lme4::.makeCC(action = "ignore", tol = formals(isSingular)$tol) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'smoppixVignette.Rmd' failed with diagnostics: must have a numeric 'tol' component --- failed re-building ‘smoppixVignette.Rmd’ SUMMARY: processing the following file failed: ‘smoppixVignette.Rmd’ Error: Vignette re-building failed. Execution halted