############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data nipalsMCIA ### ############################################################################## ############################################################################## * checking for file ‘nipalsMCIA/DESCRIPTION’ ... OK * preparing ‘nipalsMCIA’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘Analysis-of-MCIA-Decomposition.Rmd’ using rmarkdown 2025-09-08 17:48:37.793 R[64198:231602736] XType: com.apple.fonts is not accessible. 2025-09-08 17:48:37.794 R[64198:231602736] XType: XTFontStaticRegistry is enabled. --- finished re-building ‘Analysis-of-MCIA-Decomposition.Rmd’ --- re-building ‘Predicting-New-Scores.Rmd’ using rmarkdown --- finished re-building ‘Predicting-New-Scores.Rmd’ --- re-building ‘Single-Cell-Analysis.Rmd’ using rmarkdown Quitting from Single-Cell-Analysis.Rmd:144-147 [data-all-list] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'Single-Cell-Analysis.Rmd' failed with diagnostics: ! Cannot access release data for repo "Muunraker/nipalsMCIA". Check that you have provided a `.token` and that the repo is correctly specified. Failed to perform HTTP request. --- failed re-building ‘Single-Cell-Analysis.Rmd’ SUMMARY: processing the following file failed: ‘Single-Cell-Analysis.Rmd’ Error: Vignette re-building failed. Execution halted