############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data methylclock ### ############################################################################## ############################################################################## * checking for file ‘methylclock/DESCRIPTION’ ... OK * preparing ‘methylclock’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘methylclock.Rmd’ using rmarkdown Quitting from methylclock.Rmd:530-540 [get_geo_gse19711] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'methylclock.Rmd' failed with diagnostics: Failed to perform HTTP request. Caused by error in `curl::curl_fetch_memory()`: ! Timeout was reached [ftp.ncbi.nlm.nih.gov]: Operation timed out after 300000 milliseconds with 33159647 out of 61080964 bytes received --- failed re-building ‘methylclock.Rmd’ SUMMARY: processing the following file failed: ‘methylclock.Rmd’ Error: Vignette re-building failed. Execution halted