############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data drawProteins ### ############################################################################## ############################################################################## * checking for file ‘drawProteins/DESCRIPTION’ ... OK * preparing ‘drawProteins’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘drawProteins_BiocStyle.Rmd’ using rmarkdown Quitting from drawProteins_BiocStyle.Rmd:69-73 [download_rel_json] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `curl::curl_fetch_memory()`: ! Server returned nothing (no headers, no data) [www.ebi.ac.uk]: Empty reply from server --- Backtrace: ▆ 1. ├─drawProteins::get_features("Q04206") 2. │ └─httr::GET(url, httr::accept_json()) 3. │ └─httr:::request_perform(req, hu$handle$handle) 4. │ ├─httr:::request_fetch(req$output, req$url, handle) 5. │ └─httr:::request_fetch.write_memory(req$output, req$url, handle) 6. │ └─curl::curl_fetch_memory(url, handle = handle) 7. └─curl:::raise_libcurl_error(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'drawProteins_BiocStyle.Rmd' failed with diagnostics: Server returned nothing (no headers, no data) [www.ebi.ac.uk]: Empty reply from server --- failed re-building ‘drawProteins_BiocStyle.Rmd’ --- re-building ‘drawProteins_extract_transcripts_BiocStyle.Rmd’ using rmarkdown --- finished re-building ‘drawProteins_extract_transcripts_BiocStyle.Rmd’ SUMMARY: processing the following file failed: ‘drawProteins_BiocStyle.Rmd’ Error: Vignette re-building failed. Execution halted