############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data RbowtieCuda ### ############################################################################## ############################################################################## * checking for file ‘RbowtieCuda/DESCRIPTION’ ... OK * preparing ‘RbowtieCuda’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes ----------------------------------- * installing *source* package ‘RbowtieCuda’ ... ** this is package ‘RbowtieCuda’ version ‘0.99.0’ ** using staged installation ** libs cd "../src/nvbio/build" && rm -f CMakeCache.txt && cmake .. -- The C compiler identification is AppleClang 14.0.0.14000029 -- The CXX compiler identification is AppleClang 14.0.0.14000029 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /Library/Developer/CommandLineTools/usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /Library/Developer/CommandLineTools/usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Error at /Applications/CMake.app/Contents/share/cmake-3.23/Modules/FindCUDAToolkit.cmake:679 (message): Could not find nvcc, please set CUDAToolkit_ROOT. Call Stack (most recent call first): CMakeLists.txt:11 (find_package) -- Configuring incomplete, errors occurred! See also "/tmp/RtmpZO3HD0/Rbuild10d705ebaf2a7/RbowtieCuda/src/nvbio/build/CMakeFiles/CMakeOutput.log". make: *** [all] Error 1 ERROR: compilation failed for package ‘RbowtieCuda’ * removing ‘/private/tmp/RtmpZO3HD0/Rinst10d704390e287/RbowtieCuda’ ----------------------------------- ERROR: package installation failed