############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data MethReg ### ############################################################################## ############################################################################## * checking for file ‘MethReg/DESCRIPTION’ ... OK * preparing ‘MethReg’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘MethReg.Rmd’ using rmarkdown Quitting from MethReg.Rmd:196-199 [unnamed-chunk-6] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `MatrixGenerics:::.load_next_suggested_package_to_search()`: ! Failed to find a rowRanges() method for NULL objects. --- Backtrace: ▆ 1. ├─SummarizedExperiment::rowRanges(dna.met.chr21.se) 2. └─SummarizedExperiment::rowRanges(dna.met.chr21.se) 3. ├─methods::callGeneric() 4. │ └─base::eval(call, parent.frame()) 5. │ └─base::eval(call, parent.frame()) 6. ├─MatrixGenerics::rowRanges(x = x) 7. └─MatrixGenerics::rowRanges(x = x) 8. ├─methods::callGeneric() 9. │ └─base::eval(call, parent.frame()) 10. │ └─base::eval(call, parent.frame()) 11. ├─MatrixGenerics::rowRanges(x = x) 12. └─MatrixGenerics::rowRanges(x = x) 13. └─MatrixGenerics:::.load_next_suggested_package_to_search(x) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'MethReg.Rmd' failed with diagnostics: Failed to find a rowRanges() method for NULL objects. --- failed re-building ‘MethReg.Rmd’ SUMMARY: processing the following file failed: ‘MethReg.Rmd’ Error: Vignette re-building failed. Execution halted