############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data mariner ### ############################################################################## ############################################################################## * checking for file ‘mariner/DESCRIPTION’ ... OK * preparing ‘mariner’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘introduction_to_mariner.Rmd’ using rmarkdown Quitting from introduction_to_mariner.Rmd:423-430 [pullPixels] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: ! File doesn't have the given chr_chr map 10_10. --- Backtrace: ▆ 1. ├─mariner::pullHicPixels(...) 2. └─mariner::pullHicPixels(...) 3. └─mariner (local) .local(...) 4. └─mariner:::.pullMatrix(...) 5. ├─data.table::as.data.table(...) 6. └─strawr::straw(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'introduction_to_mariner.Rmd' failed with diagnostics: File doesn't have the given chr_chr map 10_10. --- failed re-building ‘introduction_to_mariner.Rmd’ SUMMARY: processing the following file failed: ‘introduction_to_mariner.Rmd’ Error: Vignette re-building failed. Execution halted