############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ProteoDisco ### ############################################################################## ############################################################################## * checking for file ‘ProteoDisco/DESCRIPTION’ ... OK * preparing ‘ProteoDisco’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘Overview_ProteoDisco.Rmd’ using rmarkdown Quitting from Overview_ProteoDisco.Rmd:391-433 [Import splice-junctions] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: ! BiocParallel errors 1 remote errors, element index: 1 0 unevaluated and other errors first remote error: Error: vector memory limit of 64.0 Gb reached, see mem.maxVSize() --- Backtrace: ▆ 1. └─ProteoDisco::generateJunctionModels(...) 2. ├─BiocParallel::bplapply(...) 3. └─BiocParallel::bplapply(...) 4. └─BiocParallel:::.bpinit(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'Overview_ProteoDisco.Rmd' failed with diagnostics: BiocParallel errors 1 remote errors, element index: 1 0 unevaluated and other errors first remote error: Error: vector memory limit of 64.0 Gb reached, see mem.maxVSize() --- failed re-building ‘Overview_ProteoDisco.Rmd’ SUMMARY: processing the following file failed: ‘Overview_ProteoDisco.Rmd’ Error: Vignette re-building failed. Execution halted