Changes in version 0.99.6 New Features - Added export functions for popular immune repertoire analysis tools: - exportMiXCR(): Export sequences for MiXCR custom library building - exportTRUST4(): Export sequences for TRUST4 analysis - exportCellRanger(): Export sequences for 10x Cell Ranger VDJ reference - exportIgBLAST(): Export sequences for IgBLAST database creation - Export functions work with sequences from both IMGT and OGRDB sources Documentation Improvements - Standardized roxygen2 documentation across all functions with proper formatting using \code{}, \strong{}, \itemize{}, and \url{} - Added comprehensive @seealso sections linking related functions - Improved parameter documentation with explicit type specifications - Enhanced package-level documentation with function overview - Fixed typo in is_ogrdb_available() documentation (was incorrectly referencing IMGT) Changes in version 0.99.5 - Added package level man page - Updated R version dependency from 4.2.0 to 4.5.0 - Added installation instruction via Bioconductor to README and vignette - Renamed getting-started vignette to immReferent Changes in version 0.99.4 - Adding return documentation to OGRDB functions - Requiring R 4.2 due to use of pipe Changes in version 0.99.3 - Adding .Rhistory to gitignore - Added immReferent to profile on support.bioconductor.org - Adding .Rhistory to gitignore - Added immReferent to profile on support.bioconductor.org Changes in version 0.99.2 Add Support for OGRDB - internal .fetch_airr_files() - getAIRR main downloading function - loadAIRR for loading sequences into environment - refreshAIRR to update sequences - listAIRR to list archived versions Changes in version 0.99.1 - Redirected HLA-based query to IPD-HLA/IMGT FTP site Changes in version 0.99.0 Initial release