Package: fobitools
Title: Tools for Manipulating the FOBI Ontology
Version: 1.19.0
Authors@R: 
    c(person(given = "Pol",
             family = "Castellano-Escuder",
             role = c("aut", "cre"),
             email = "polcaes@gmail.com",
             comment = c(ORCID = "0000-0001-6466-877X")),
      person(given = "Alex",
             family = "Sánchez-Pla",
             role = "aut",
             email = "asanchez@ub.edu",
             comment = c(ORCID = "0000-0002-8673-7737"))
             )
Description: A set of tools for interacting with the Food-Biomarker
        Ontology (FOBI). A collection of basic manipulation tools for
        biological significance analysis, graphs, and text mining
        strategies for annotating nutritional data.
License: GPL-3
Encoding: UTF-8
LazyData: true
biocViews: MassSpectrometry, Metabolomics, Software, Visualization,
        BiomedicalInformatics, GraphAndNetwork, Annotation,
        Cheminformatics, Pathways, GeneSetEnrichment
Imports: clisymbols, crayon, dplyr, fgsea, ggplot2, ggraph, magrittr,
        ontologyIndex, purrr, RecordLinkage, stringr, textclean,
        tictoc, tidygraph, tidyr, vroom
Suggests: BiocStyle, covr, ggrepel, kableExtra, knitr,
        metabolomicsWorkbenchR, POMA, rmarkdown, rvest,
        SummarizedExperiment, testthat (>= 2.3.2), tidyverse
RoxygenNote: 7.3.2
Depends: R (>= 4.1)
URL: https://github.com/pcastellanoescuder/fobitools/
BugReports: https://github.com/pcastellanoescuder/fobitools/issues
VignetteBuilder: knitr
Config/pak/sysreqs: libfontconfig1-dev libfreetype6-dev libglpk-dev
        libicu-dev libxml2-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 15:06:08 UTC
RemoteUrl: https://github.com/bioc/fobitools
RemoteRef: HEAD
RemoteSha: f026ba64a1fce2ed1fdf4b1b2a9a4587097deb24
NeedsCompilation: no
Packaged: 2026-01-22 19:55:38 UTC; root
Author: Pol Castellano-Escuder [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-6466-877X>),
  Alex Sánchez-Pla [aut] (ORCID: <https://orcid.org/0000-0002-8673-7737>)
Maintainer: Pol Castellano-Escuder <polcaes@gmail.com>
Built: R 4.6.0; ; 2026-01-22 19:57:43 UTC; windows
