Package: atSNP
Type: Package
Title: Affinity test for identifying regulatory SNPs
Version: 1.25.0
Date: 2021-4-26
Authors@R: c(person(given = "Chandler", family = "Zuo", role = "aut"),
        person(given = "Sunyoung",family = "Shin",role = c("aut", "cre"), email = "sunyoung.shin@utdallas.edu"),
        person(given = "Sunduz", family = "Keles", role = "aut"))
Description: atSNP performs affinity tests of motif matches with the
        SNP or the reference genomes and SNP-led changes in motif
        matches.
License: GPL-2
LinkingTo: Rcpp
Depends: R (>= 3.6)
Suggests: BiocStyle, knitr, rmarkdown
Imports: BSgenome, BiocFileCache, BiocParallel, Rcpp, data.table,
        ggplot2, grDevices, graphics, grid, motifStack, rappdirs,
        stats, testthat, utils, lifecycle
RoxygenNote: 6.1.1
biocViews: Software, ChIPSeq, GenomeAnnotation, MotifAnnotation,
        Visualization
URL: https://github.com/sunyoungshin/atSNP
BugReports: https://github.com/sunyoungshin/atSNP/issues
VignetteBuilder: knitr
Config/pak/sysreqs: make libgsl0-dev libbz2-dev libicu-dev liblzma-dev
        libxml2-dev libssl-dev xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-04-15 15:41:11 UTC
RemoteUrl: https://github.com/bioc/atSNP
RemoteRef: HEAD
RemoteSha: 3f4ecf571d648e909854901221e5e3bbf386ac01
NeedsCompilation: yes
Packaged: 2025-12-23 07:14:09 UTC; root
Author: Chandler Zuo [aut],
  Sunyoung Shin [aut, cre],
  Sunduz Keles [aut]
Maintainer: Sunyoung Shin <sunyoung.shin@utdallas.edu>
Built: R 4.6.0; x86_64-w64-mingw32; 2025-12-23 07:17:11 UTC; windows
Archs: x64
