# PLSDA-batch

## Documentation for package ‘PLSDAbatch’ version 1.99.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

AD_data | Anaerobic digestion study
alignment_score | Alignment Scores for Evaluating the Degree of Mixing Samples
box_plot | Box Plot by Batch
darken | Darken Colors by Decreasing Brightness
deflate_mtx | Matrix Deflation
density_plot | Density Plot by Batch
lighten | Lighten Colors by Increasing Brightness
linear_regres | Linear Regression
partVar_plot | Partitioned Variance Plot
pb_color | Color Palette for PLSDAbatch Plots
percentile_norm | Percentile normalisation
PLSDA | Partial Least Squares Discriminant Analysis
PLSDA_batch | Partial Least Squares Discriminant Analysis for Batch Effect Correction
PreFL | Prefiltering for Microbiome Count Data
Scatter_Density | Scatter Plot of Components with Marginal Density Plots
sponge_data | Sponge _A. aerophoba_ study