Package: GeneRegionScan
Version: 1.67.0
Date: 2009-10-16
Title: GeneRegionScan
Author: Lasse Folkersen, Diego Diez
Maintainer: Lasse Folkersen <lasfol@cbs.dtu.dk>
Depends: methods, Biobase (>= 2.5.5), Biostrings
Imports: S4Vectors (>= 0.9.25), Biobase (>= 2.5.5), affxparser,
        RColorBrewer, Biostrings
Suggests: BSgenome, affy, AnnotationDbi
LazyLoad: yes
Description: A package with focus on analysis of discrete regions of
        the genome. This package is useful for investigation of one or
        a few genes using Affymetrix data, since it will extract probe
        level data using the Affymetrix Power Tools application and
        wrap these data into a ProbeLevelSet. A ProbeLevelSet directly
        extends the expressionSet, but includes additional information
        about the sequence of each probe and the probe set it is
        derived from. The package includes a number of functions used
        for plotting these probe level data as a function of location
        along sequences of mRNA-strands. This can be used for analysis
        of variable splicing, and is especially well suited for use
        with exon-array data.
License: GPL (>= 2)
biocViews: Microarray, DataImport, SNP, OneChannel, Visualization
Config/pak/sysreqs: zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:02:41 UTC
RemoteUrl: https://github.com/bioc/GeneRegionScan
RemoteRef: HEAD
RemoteSha: e7590a3d93b0b23f532348b839041d1ce343fb58
NeedsCompilation: no
Packaged: 2025-11-02 14:53:57 UTC; root
Built: R 4.6.0; ; 2025-11-02 14:56:08 UTC; windows
