5e636389fe04ea6cb29adc81c1b4ad44 *CITATION
0c451b91146e57ec769cb287151c3385 *DESCRIPTION
3cecba054e238332c4905be7c9288639 *INDEX
e1690d545e32489c49a49c3542bc0782 *Meta/Rd.rds
7ab1c295c3425a2f1be08523e9cbc6da *Meta/data.rds
50a9fa3e1aa2c47fa7bdbd6e6bb8974e *Meta/features.rds
48a67e60c651e060034fa6e2a92087c6 *Meta/hsearch.rds
4ff99c52046e05ce8912c785b7d93fe3 *Meta/links.rds
cbe53bf22a5107b2a72f28f07a00d3bf *Meta/nsInfo.rds
6eb8c0973a2ff7fb1b3ca9594ecad628 *Meta/package.rds
5147c78a24e291a67d344bbfd0577e06 *Meta/vignette.rds
4e6236b781c03714bc404747c656e4dc *NAMESPACE
5d5e4382da837631fba49152040119ff *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/EventPointer
4a165df7a5df7b7d9b48fd32197fd10a *R/EventPointer.rdb
9809e374c61b772d30a97e82336a6b27 *R/EventPointer.rdx
c342683ebd5338b2d44133b4bb83c12a *data/Rdata.rdb
71f703f37b895d5470b54978cb689d0f *data/Rdata.rds
8c94755897aef9a208a59ccb37f5316c *data/Rdata.rdx
b8717626fa6a1934be94e59f3dd07d7c *doc/EventPointer.R
c55221c93a54781bb57782c134c427d0 *doc/EventPointer.Rmd
b3a8d79ae6f08451e61f72b065169512 *doc/EventPointer.html
141b7859c67d2b36f33b3ab87b1d14a8 *doc/index.html
3ac9acf9a45f1da08d193593fcee9f9b *extdata/DONSON.gtf
ee1a801a0d535e9dae65e4af8fe48c5f *extdata/EventsDetection_EPBAM.RData
1c64021182c0a5666f3f86b08a262de7 *extdata/EventsFound.txt
711aecec9689161142fabf38002610f5 *extdata/EventsFound_Gencode24_2genes.txt
85641d3af88bbafb9c07ecac41ceea41 *extdata/EventsFound_RNASeq.txt
bd2d2b5680a102b66cd6d4844ff61958 *extdata/Events_found_class.txt
11a648bffb52d60db975033d2e3c4c7b *extdata/FBXO31.gtf
b35e6038b7009a26a6be70b0f1aab46b *extdata/Junction_Probes.txt
f3ce8f6342aef0d0804a1402c01d6f05 *extdata/PSI_boots.RData
d378a846d595e1750ae22d5552cd1ea8 *extdata/PSR_Probes.txt
8690af441fddc6b08ad58c1ef98a7d43 *extdata/SgFC.RData
4ab235f7af849511e1ba51daebc07107 *extdata/TotalEventsFound.csv
3092746f268a10b2a7775ae038ab6e9e *extdata/bams/SRR1513329Aligned.sortedByCoord.out_chr3.bam
6bf8e7d4ede971debea25f1b598760a9 *extdata/bams/SRR1513329Aligned.sortedByCoord.out_chr3.bam.bai
6acdd37bd4b1ba809aa6476d042e44ff *extdata/bams/SRR1513329_switched_A5_A3Aligned.sortedByCoord.out_chr3.bam
6b17f3cda8714b310bbbe20c3fd9b682 *extdata/bams/SRR1513329_switched_A5_A3Aligned.sortedByCoord.out_chr3.bam.bai
092f0f6476d2bf57c3706edc31765d77 *extdata/bams/SRR1513329_switched_SEAligned.sortedByCoord.out_chr3.bam
10a3322a9a26025bb7d03e20acb4382e *extdata/bams/SRR1513329_switched_SEAligned.sortedByCoord.out_chr3.bam.bai
e5993a875ce571498249eb7a7bc30736 *extdata/bams/SRR1513330Aligned.sortedByCoord.out_chr3.bam
290c71c768782e3b3b16e40c91e89b22 *extdata/bams/SRR1513330Aligned.sortedByCoord.out_chr3.bam.bai
50d3ad3ebf7b64c613dd600d072b1472 *extdata/bams/SRR1513330_switched_A5_A3Aligned.sortedByCoord.out_chr3.bam
ca111f3eaa91603471e26444d63f7d7a *extdata/bams/SRR1513330_switched_A5_A3Aligned.sortedByCoord.out_chr3.bam.bai
b9985ef341a12c07a3abf1d2d7f2c664 *extdata/bams/SRR1513330_switched_SEAligned.sortedByCoord.out_chr3.bam
a7b0371f18ad182716515dfa6461dcd0 *extdata/bams/SRR1513330_switched_SEAligned.sortedByCoord.out_chr3.bam.bai
28f80c3af10ec2734d1f5205366edb9f *extdata/bams/SRR1513331Aligned.sortedByCoord.out_chr3.bam
f43f66b4da66987496715728a832746c *extdata/bams/SRR1513331Aligned.sortedByCoord.out_chr3.bam.bai
677856133936aaf6ec420132e1895870 *extdata/bams/SRR1513331_switched_A5_A3Aligned.sortedByCoord.out_chr3.bam
f87ef425fbf5d2b72511c80c6ca99648 *extdata/bams/SRR1513331_switched_A5_A3Aligned.sortedByCoord.out_chr3.bam.bai
7280fb5d3d1c6eef73f60b70985e9787 *extdata/bams/SRR1513331_switched_SEAligned.sortedByCoord.out_chr3.bam
c0dcfc457c5d514fd2b1a45f3a2fcea5 *extdata/bams/SRR1513331_switched_SEAligned.sortedByCoord.out_chr3.bam.bai
8abd2e452150b00b546ded66154a7f55 *extdata/bams/refseq_hg19.formatted.filtered.gtf
e4a3a6a31b08d54d59b41394f1f6be20 *extdata/example_recla_events.gtf
ee5d0f0b738d0240714b3db909f37bb5 *extdata/example_recla_genes.gtf
f0327167613a83d84e5656d1c8eb07e1 *extdata/gencode.v24.ann_2genes.gtf
fcbed62df71c682873886a309ae80fed *extdata/output/ERR315326/abundance.h5
ad29b5a849c6d1f436e16f49ae24ba00 *extdata/output/ERR315326/abundance.tsv
f2f96c212fbc279e9fe9a23129413189 *extdata/output/ERR315326/run_info.json
cb21755aee0400ffc872d7dd746af250 *extdata/output/ERR315400/abundance.h5
3a54e621b6458beba037c7158699838b *extdata/output/ERR315400/abundance.tsv
33b703ee1fd5890bc3823508544b2464 *extdata/output/ERR315400/run_info.json
7edb41bff4cd7f7b42d96b3c598201bd *extdata/output/ERR315407/abundance.h5
214552fce13dad9bfbc0e2d602149a86 *extdata/output/ERR315407/abundance.tsv
81d24c8aa3bea442a20b467a847c63ca *extdata/output/ERR315407/run_info.json
fbbf655020a543954252507cce2b1e9e *extdata/output/ERR315494/abundance.h5
cbc67badc0ddcba6dd9647ebf7aafe6e *extdata/output/ERR315494/abundance.tsv
a344ac7092db39ee0525362aadd3428b *extdata/output/ERR315494/run_info.json
ccebdacaa0fc5dc1d60fb6754c77f677 *help/AnIndex
52f043b2ddd6605c9888a87e878dd955 *help/EventPointer.rdb
a458bc19368b04f715430308ff2eca29 *help/EventPointer.rdx
f288d7900e7f28b877850858f5bbb279 *help/aliases.rds
d106f21c7498843313ab4099f95de640 *help/paths.rds
5a69094fec667630b3a50826fc3f2be4 *html/00Index.html
ee41876c0116916bb04bcf4fe3e43d78 *html/R.css
aee747c289e8a7b622b075d1824a13b4 *libs/x64/EventPointer.dll
c063f0a1939fefd92e0370f11e6eed58 *libs/x64/symbols.rds
23ad534a3344f44285477701bc2a04d2 *unitTests/test_AuxFunctions.R
88064e47ecbcab7b38ef82395c458c63 *unitTests/test_CDFfromGTF.R
8da8a8d8ed24fdaf6927daea145ea1c7 *unitTests/test_EventDetection.R
d0366998c578b49ac4d353e208643d2a *unitTests/test_EventDetectionMultipath.R
251c3055f3f7349a9dde517126e9cd7c *unitTests/test_EventDetection_transcriptome.R
194dfa5dc857606a718d855385a030ac *unitTests/test_EventPointer.R
c19e17a2855f1054e9a17ac74be59df2 *unitTests/test_EventPointer_Bootstraps.R
db93944fddb7253c30b9277392a875f4 *unitTests/test_EventPointer_IGV.R
899ab180b4602d3e5f6159cccf3644bb *unitTests/test_EventPointer_RNASeq.R
d8b59526013adbebee3c3a5e8e7110a6 *unitTests/test_EventPointer_RNASeq_IGV.R
4e7bb1489e7dcdf40e35326967459282 *unitTests/test_EventPointer_RNASeq_TranRef.R
34a9e581301f142beb2e682828cebd0b *unitTests/test_EventPointer_RNASeq_TranRef_IGV.R
634b37be7e9be3bd0b0d7ac28f9c644c *unitTests/test_FindPrimers.R
274362055bf4535a7857c422e3d21982 *unitTests/test_GetPSI_FromTranRef.R
5868df9a4ee20c1ce6ec30a5e408e21f *unitTests/test_PSI_Statistic.R
bb2daef7ab68d1535a03cc11f7efb0c4 *unitTests/test_Protein_Domain_Enrichment.R
a630a087f8de27778966c9c310cfb16d *unitTests/test_ResulTable.R
58c25ab38a55793fae3b27e00eace854 *unitTests/test_getbootstrapdata.R
