flowMeans
This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see flowMeans.
Non-parametric Flow Cytometry Data Gating
Bioconductor version: 3.8
Identifies cell populations in Flow Cytometry data using non-parametric clustering and segmented-regression-based change point detection. Note: R 2.11.0 or newer is required.
Author: Nima Aghaeepour
Maintainer: Nima Aghaeepour <naghaeep at gmail.com>
Citation (from within R, enter
citation("flowMeans")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("flowMeans")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowMeans")| flowMeans: Non-parametric Flow Cytometry Data Gating | R Script | |
| Reference Manual |
Details
| biocViews | CellBiology, Clustering, FlowCytometry, ImmunoOncology, Software |
| Version | 1.42.1 |
| In Bioconductor since | BioC 2.6 (R-2.11) (14 years) |
| License | Artistic-2.0 |
| Depends | R (>= 2.10.0) |
| Imports | Biobase, graphics, grDevices, methods, rrcov, stats, feature, flowCore |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | CONFESS, flowType |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | flowMeans_1.42.1.tar.gz |
| Windows Binary | flowMeans_1.42.1.zip |
| Mac OS X 10.11 (El Capitan) | flowMeans_1.42.1.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/flowMeans |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/flowMeans |
| Bioc Package Browser | https://code.bioconductor.org/browse/flowMeans/ |
| Package Short Url | https://bioconductor.org/packages/flowMeans/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.8 | Source Archive |