To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Mirsynergy")
In most cases, you don't need to download the package archive at all.
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This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see Mirsynergy.
Bioconductor version: 3.4
Detect synergistic miRNA regulatory modules by overlapping neighbourhood expansion.
Author: Yue Li
Maintainer: Yue Li <yueli at cs.toronto.edu>
Citation (from within R,
enter citation("Mirsynergy")):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Mirsynergy")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Mirsynergy")
| R Script | Mirsynergy | |
| Reference Manual | ||
| Text | NEWS |
| biocViews | Clustering, Software |
| Version | 1.10.0 |
| In Bioconductor since | BioC 2.14 (R-3.1) (3 years) |
| License | GPL-2 |
| Depends | R (>= 3.0.2), igraph, ggplot2 |
| Imports | graphics, grDevices, gridExtra, Matrix, parallel, RColorBrewer, reshape, scales, utils |
| LinkingTo | |
| Suggests | glmnet, RUnit, BiocGenerics, knitr |
| SystemRequirements | |
| Enhances | |
| URL | http://www.cs.utoronto.ca/~yueli/Mirsynergy.html |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Follow Installation instructions to use this package in your R session.
| Package Source | Mirsynergy_1.10.0.tar.gz |
| Windows Binary | Mirsynergy_1.10.0.zip |
| Mac OS X 10.9 (Mavericks) | Mirsynergy_1.10.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/Mirsynergy/tree/release-3.4 |
| Package Short Url | http://bioconductor.org/packages/Mirsynergy/ |
| Package Downloads Report | Download Stats |
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